[{"_1":2,"_3":-5,"_4":-5},"loaderData",{"_5":6,"_7":8,"_9":10},"actionData","errors","root",{"_154":155,"_156":157},"routes/_app.x.$handle.$name",{"_94":93,"_32":45,"_103":84,"_27":104,"_13":14,"_105":-5,"_11":106,"_107":108,"_109":110,"_111":112,"_113":114,"_20":-5,"_115":-5,"_116":-5,"_117":25,"_118":119,"_120":121,"_122":-5,"_123":-5,"_124":125},"routes/_app.x.$handle.$name.branch.$branch.version.$version.diff",{"_11":12,"_13":14,"_15":16,"_17":-5,"_18":-5},"project",{"_43":44,"_32":45,"_38":46,"_47":-5,"_48":25,"_49":50,"_51":50,"_52":53,"_54":-5,"_18":55,"_56":-5,"_57":25,"_58":-5,"_59":-5,"_60":61,"_62":63,"_64":-5,"_65":-5,"_66":-5,"_67":-5,"_68":69,"_70":69,"_71":72,"_73":72,"_74":72,"_75":69,"_76":69,"_77":78,"_79":80,"_81":82,"_83":25},"version",6,"changes",[19],"aiChatInfo","userId",{"_20":21,"_22":23,"_24":25,"_26":25,"_27":28,"_29":28},"file",{"_30":31,"_32":28,"_33":34,"_35":37,"_38":39,"_40":14,"_41":42,"_24":25},"previous",{"_30":31,"_32":28,"_33":34,"_35":36},"deleted",false,"deletedHere","path","main.ts","latestPath","fileId","2e726a32-7a32-11f1-8bb5-1607ee4eb77e","name","fileType","http","content","// EPA CompTox (CTX) Chemical API MCP Server v2\n// Uniform response envelope, batch search, consistent miss handling\n// Set COMPTOX_API_KEY in Val Town: Settings > Environment Variables\n\nconst PROTOCOL_VERSION = \"2025-03-26\";\nconst SOURCE = \"comptox\";\nconst SERVER_INFO = { name: SOURCE, version: \"2.0.0\" };\nconst CTX_BASE = \"https://comptox.epa.gov/ctx-api/chemical\";\n\n// ── Response helpers ─────────────────────────────────────────────\n\nfunction envelope(\n ok: boolean,\n count: number,\n results: any[],\n error: any = null,\n) {\n return { ok, count, results, source: SOURCE, error };\n}\n\nfunction errorEnvelope(code: string, message: string) {\n return envelope(false, 0, [], { code, message });\n}\n\nfunction trimResult(item: any): any {\n return {\n dtxsid: item.dtxsid ?? null,\n dtxcid: item.dtxcid ?? null,\n casrn: item.casrn ?? null,\n preferredName: item.preferredName ?? null,\n smiles: item.smiles ?? null,\n inchikey: item.inchikey ?? null,\n molecularFormula: item.molecularFormula ?? null,\n molecularWeight: item.molecularWeight ?? null,\n monoisotopicMass: item.monoisotopicMass ?? null,\n iupacName: item.iupacName ?? null,\n };\n}\n\n// ── Tool definitions ─────────────────────────────────────────────\n\nconst TOOLS = [\n {\n name: \"search_chemical\",\n description:\n \"Search EPA CompTox (DSSTox) for a chemical by exact match. Accepts chemical name, CAS Registry Number (CASRN), \" +\n \"DTXSID, DTXCID, or InChIKey. Returns DTXSID, DTXCID, CASRN, preferred name, SMILES, and other identifiers. \" +\n \"Accepts a single query string OR an array of queries for batch lookup.\",\n inputSchema: {\n type: \"object\",\n properties: {\n query: {\n type: \"string\",\n description: \"Chemical name, CASRN, DTXSID, DTXCID, or InChIKey\",\n },\n queries: {\n type: \"array\",\n items: { type: \"string\" },\n description:\n \"Array of queries for batch lookup. Use this OR query, not both.\",\n },\n },\n },\n },\n {\n name: \"search_starts_with\",\n description:\n \"Search EPA CompTox for chemicals whose name, CASRN, DTXSID, or InChIKey starts with the given string. \" +\n \"Returns up to 20 results by default.\",\n inputSchema: {\n type: \"object\",\n properties: {\n query: {\n type: \"string\",\n description:\n \"Starting string to search for (e.g. 'bisphenol', '108-94', 'DTXSID70201')\",\n },\n max_results: {\n type: \"number\",\n description: \"Maximum results to return (default 20, max 100)\",\n },\n },\n required: [\"query\"],\n },\n },\n {\n name: \"search_by_smiles\",\n description:\n \"Look up a chemical in EPA CompTox by its SMILES string. Returns the matching compound's DTXSID, CASRN, \" +\n \"preferred name, and other identifiers.\",\n inputSchema: {\n type: \"object\",\n properties: {\n smiles: {\n type: \"string\",\n description: \"SMILES string, e.g. 'O=C1CCCCC1' for cyclohexanone\",\n },\n },\n required: [\"smiles\"],\n },\n },\n];\n\n// ── API helpers ──────────────────────────────────────────────────\n\nasync function ctxFetch(url: string, apiKey: string): Promise {\n const res = await fetch(url, {\n headers: { \"accept\": \"application/json\", \"x-api-key\": apiKey },\n });\n\n if (!res.ok) {\n // Normalize 400/404 misses to ok:true, count:0 — not an error\n if (res.status === 404 || res.status === 400) {\n return envelope(true, 0, []);\n }\n const body = await res.text();\n return errorEnvelope(\n \"COMPTOX_API_ERROR\",\n `CompTox API error ${res.status}: ${body}`,\n );\n }\n\n const data = await res.json();\n\n if (Array.isArray(data)) {\n const trimmed = data\n .filter((item: any) => !item.smiles?.includes(\";\"))\n .map(trimResult);\n return envelope(true, trimmed.length, trimmed);\n } else if (data && typeof data === \"object\") {\n const result = trimResult(data);\n if (result.smiles?.includes(\";\")) return envelope(true, 0, []);\n return envelope(true, 1, [result]);\n }\n\n return envelope(true, 0, []);\n}\n\nasync function searchSingle(query: string, apiKey: string): Promise {\n const url = `${CTX_BASE}/search/equal/${encodeURIComponent(query)}`;\n return ctxFetch(url, apiKey);\n}\n\nasync function searchBatch(queries: string[], apiKey: string): Promise {\n const perQuery = await Promise.all(\n queries.map(async (q) => {\n const result = await searchSingle(q, apiKey);\n return { query: q, ...result };\n }),\n );\n return {\n ok: true,\n batch: true,\n source: SOURCE,\n error: null,\n results: perQuery,\n };\n}\n\n// ── Tool dispatch ────────────────────────────────────────────────\n\nasync function handleToolCall(\n toolName: string,\n args: any,\n apiKey: string,\n): Promise {\n switch (toolName) {\n case \"search_chemical\":\n if (args.queries && Array.isArray(args.queries)) {\n return searchBatch(args.queries, apiKey);\n } else if (args.query) {\n return searchSingle(args.query, apiKey);\n } else {\n return errorEnvelope(\n \"BAD_INPUT\",\n \"Provide either 'query' (string) or 'queries' (string[])\",\n );\n }\n\n case \"search_starts_with\": {\n const top = Math.min(args.max_results || 20, 100);\n const url = `${CTX_BASE}/search/start-with/${\n encodeURIComponent(args.query)\n }?top=${top}`;\n return ctxFetch(url, apiKey);\n }\n\n case \"search_by_smiles\": {\n const url = `${CTX_BASE}/detail/search/by-smiles/?smiles=${\n encodeURIComponent(args.smiles)\n }`;\n return ctxFetch(url, apiKey);\n }\n\n default:\n return errorEnvelope(\"UNKNOWN_TOOL\", `Unknown tool: ${toolName}`);\n }\n}\n\n// ── MCP protocol ─────────────────────────────────────────────────\n\nfunction jsonRpcResponse(id: any, result: any) {\n return { jsonrpc: \"2.0\", id, result };\n}\n\nfunction jsonRpcError(id: any, code: number, message: string) {\n return { jsonrpc: \"2.0\", id, error: { code, message } };\n}\n\nasync function handleMcpRequest(body: any, apiKey: string) {\n const { jsonrpc, id, method, params } = body;\n if (jsonrpc !== \"2.0\") {\n return jsonRpcError(id, -32600, \"Invalid Request: must use JSON-RPC 2.0\");\n }\n if (id === undefined || id === null) return null;\n\n switch (method) {\n case \"initialize\":\n return jsonRpcResponse(id, {\n protocolVersion: PROTOCOL_VERSION,\n capabilities: { tools: {} },\n serverInfo: SERVER_INFO,\n });\n case \"tools/list\":\n return jsonRpcResponse(id, { tools: TOOLS });\n case \"tools/call\": {\n if (!apiKey) {\n const err = errorEnvelope(\"CONFIG_ERROR\", \"COMPTOX_API_KEY not set\");\n return jsonRpcResponse(id, {\n content: [{ type: \"text\", text: JSON.stringify(err) }],\n isError: true,\n });\n }\n const result = await handleToolCall(\n params?.name,\n params?.arguments || {},\n apiKey,\n );\n return jsonRpcResponse(id, {\n content: [{ type: \"text\", text: JSON.stringify(result, null, 2) }],\n isError: !result.ok,\n });\n }\n case \"ping\":\n return jsonRpcResponse(id, {});\n default:\n return jsonRpcError(id, -32601, `Method not found: ${method}`);\n }\n}\n\n// ── Val Town HTTP handler ────────────────────────────────────────\n\nexport default async function (req: Request): Promise {\n const url = new URL(req.url);\n const apiKey = Deno.env.get(\"COMPTOX_API_KEY\") || \"\";\n\n if (req.method === \"OPTIONS\") {\n return new Response(null, {\n status: 204,\n headers: {\n \"Access-Control-Allow-Origin\": \"*\",\n \"Access-Control-Allow-Methods\": \"GET, POST, OPTIONS\",\n \"Access-Control-Allow-Headers\": \"Content-Type, Accept, Mcp-Session-Id\",\n },\n });\n }\n\n if (\n url.pathname.startsWith(\"/.well-known/\") || url.pathname === \"/register\"\n ) {\n return new Response(\"Not found\", { status: 404 });\n }\n\n if (req.method === \"GET\") {\n return new Response(\n \"EPA CompTox Chemical MCP Server v2\\n\\nPOST to this URL with JSON-RPC 2.0 MCP messages.\",\n { status: 200, headers: { \"Content-Type\": \"text/plain\" } },\n );\n }\n\n if (req.method === \"POST\") {\n let body;\n try {\n body = await req.json();\n } catch {\n return Response.json(\n jsonRpcError(null, -32700, \"Parse error: invalid JSON\"),\n { status: 400, headers: { \"Access-Control-Allow-Origin\": \"*\" } },\n );\n }\n const result = await handleMcpRequest(body, apiKey);\n if (result === null) {\n return new Response(null, {\n status: 204,\n headers: { \"Access-Control-Allow-Origin\": \"*\" },\n });\n }\n return Response.json(result, {\n status: 200,\n headers: {\n \"Content-Type\": \"application/json\",\n \"Access-Control-Allow-Origin\": \"*\",\n },\n });\n }\n\n return new Response(\"Method not allowed\", { status: 405 });\n}","// EPA CompTox (CTX) Chemical API MCP Server v2.1\n// Uniform envelope, rate-limited serial batch, consistent miss handling\n// Set COMPTOX_API_KEY in Val Town: Settings > Environment Variables\n\nconst PROTOCOL_VERSION = \"2025-03-26\";\nconst SOURCE = \"comptox\";\nconst SERVER_INFO = { name: SOURCE, version: \"2.1.0\" };\nconst CTX_BASE = \"https://comptox.epa.gov/ctx-api/chemical\";\nconst RATE_LIMIT_MS = 200;\n\nfunction envelope(\n ok: boolean,\n count: number,\n results: any[],\n error: any = null,\n) {\n return { ok, count, results, source: SOURCE, error };\n}\nfunction errorEnvelope(code: string, message: string) {\n return envelope(false, 0, [], { code, message });\n}\nfunction sleep(ms: number) {\n return new Promise((r) => setTimeout(r, ms));\n}\n\nfunction trimResult(item: any): any {\n return {\n dtxsid: item.dtxsid ?? null,\n dtxcid: item.dtxcid ?? null,\n casrn: item.casrn ?? null,\n preferredName: item.preferredName ?? null,\n smiles: item.smiles ?? null,\n inchikey: item.inchikey ?? null,\n molecularFormula: item.molecularFormula ?? null,\n molecularWeight: item.molecularWeight ?? null,\n monoisotopicMass: item.monoisotopicMass ?? null,\n iupacName: item.iupacName ?? null,\n };\n}\n\nconst TOOLS = [\n {\n name: \"search_chemical\",\n description:\n \"Search EPA CompTox (DSSTox) for a chemical by exact match. Accepts chemical name, CASRN, \" +\n \"DTXSID, DTXCID, or InChIKey. Returns DTXSID, DTXCID, CASRN, preferred name, SMILES. \" +\n \"Accepts a single query OR an array of queries for batch lookup. \" +\n \"Batch requests are processed serially at 5/sec to respect API rate limits.\",\n inputSchema: {\n type: \"object\",\n properties: {\n query: {\n type: \"string\",\n description:\n \"Single query (name, CASRN, DTXSID, DTXCID, or InChIKey)\",\n },\n queries: {\n type: \"array\",\n items: { type: \"string\" },\n description:\n \"Array of queries for batch lookup. Use this OR query, not both.\",\n },\n },\n },\n },\n {\n name: \"search_starts_with\",\n description:\n \"Search EPA CompTox for chemicals whose name, CASRN, DTXSID, or InChIKey starts with the given string. Returns up to 20 results by default.\",\n inputSchema: {\n type: \"object\",\n properties: {\n query: {\n type: \"string\",\n description: \"Starting string (e.g. 'bisphenol', '108-94')\",\n },\n max_results: {\n type: \"number\",\n description: \"Max results (default 20, max 100)\",\n },\n },\n required: [\"query\"],\n },\n },\n {\n name: \"search_by_smiles\",\n description: \"Look up a chemical in EPA CompTox by its SMILES string.\",\n inputSchema: {\n type: \"object\",\n properties: {\n smiles: {\n type: \"string\",\n description: \"SMILES string, e.g. 'O=C1CCCCC1'\",\n },\n },\n required: [\"smiles\"],\n },\n },\n];\n\nasync function ctxFetch(url: string, apiKey: string): Promise {\n const res = await fetch(url, {\n headers: { \"accept\": \"application/json\", \"x-api-key\": apiKey },\n });\n if (!res.ok) {\n if (res.status === 404 || res.status === 400) return envelope(true, 0, []);\n const body = await res.text();\n return errorEnvelope(\"COMPTOX_API_ERROR\", `${res.status}: ${body}`);\n }\n const data = await res.json();\n if (Array.isArray(data)) {\n const trimmed = data.filter((i: any) => !i.smiles?.includes(\";\")).map(\n trimResult,\n );\n return envelope(true, trimmed.length, trimmed);\n } else if (data && typeof data === \"object\") {\n const r = trimResult(data);\n if (r.smiles?.includes(\";\")) return envelope(true, 0, []);\n return envelope(true, 1, [r]);\n }\n return envelope(true, 0, []);\n}\n\nasync function searchSingle(query: string, apiKey: string): Promise {\n return ctxFetch(\n `${CTX_BASE}/search/equal/${encodeURIComponent(query)}`,\n apiKey,\n );\n}\n\nasync function searchBatch(queries: string[], apiKey: string): Promise {\n const perQuery: any[] = [];\n for (let i = 0; i < queries.length; i++) {\n if (i > 0) await sleep(RATE_LIMIT_MS);\n const result = await searchSingle(queries[i], apiKey);\n perQuery.push({ query: queries[i], ...result });\n }\n return {\n ok: true,\n batch: true,\n source: SOURCE,\n error: null,\n results: perQuery,\n };\n}\n\nasync function handleToolCall(\n toolName: string,\n args: any,\n apiKey: string,\n): Promise {\n switch (toolName) {\n case \"search_chemical\":\n if (args.queries?.length) return searchBatch(args.queries, apiKey);\n if (args.query) return searchSingle(args.query, apiKey);\n return errorEnvelope(\n \"BAD_INPUT\",\n \"Provide query (string) or queries (string[])\",\n );\n case \"search_starts_with\": {\n const top = Math.min(args.max_results || 20, 100);\n return ctxFetch(\n `${CTX_BASE}/search/start-with/${\n encodeURIComponent(args.query)\n }?top=${top}`,\n apiKey,\n );\n }\n case \"search_by_smiles\":\n return ctxFetch(\n `${CTX_BASE}/detail/search/by-smiles/?smiles=${\n encodeURIComponent(args.smiles)\n }`,\n apiKey,\n );\n default:\n return errorEnvelope(\"UNKNOWN_TOOL\", `Unknown tool: ${toolName}`);\n }\n}\n\nfunction jsonRpcResponse(id: any, result: any) {\n return { jsonrpc: \"2.0\", id, result };\n}\nfunction jsonRpcError(id: any, code: number, message: string) {\n return { jsonrpc: \"2.0\", id, error: { code, message } };\n}\n\nasync function handleMcpRequest(body: any, apiKey: string) {\n const { jsonrpc, id, method, params } = body;\n if (jsonrpc !== \"2.0\") {\n return jsonRpcError(id, -32600, \"Invalid JSON-RPC 2.0\");\n }\n if (id === undefined || id === null) return null;\n switch (method) {\n case \"initialize\":\n return jsonRpcResponse(id, {\n protocolVersion: PROTOCOL_VERSION,\n capabilities: { tools: {} },\n serverInfo: SERVER_INFO,\n });\n case \"tools/list\":\n return jsonRpcResponse(id, { tools: TOOLS });\n case \"tools/call\": {\n if (!apiKey) {\n return jsonRpcResponse(id, {\n content: [{\n type: \"text\",\n text: JSON.stringify(\n errorEnvelope(\"CONFIG_ERROR\", \"COMPTOX_API_KEY not set\"),\n ),\n }],\n isError: true,\n });\n }\n const result = await handleToolCall(\n params?.name,\n params?.arguments || {},\n apiKey,\n );\n return jsonRpcResponse(id, {\n content: [{ type: \"text\", text: JSON.stringify(result, null, 2) }],\n isError: !result.ok,\n });\n }\n case \"ping\":\n return jsonRpcResponse(id, {});\n default:\n return jsonRpcError(id, -32601, `Method not found: ${method}`);\n }\n}\n\nexport default async function (req: Request): Promise {\n const url = new URL(req.url);\n const apiKey = Deno.env.get(\"COMPTOX_API_KEY\") || \"\";\n if (req.method === \"OPTIONS\") {\n return new Response(null, {\n status: 204,\n headers: {\n \"Access-Control-Allow-Origin\": \"*\",\n \"Access-Control-Allow-Methods\": \"GET, POST, OPTIONS\",\n \"Access-Control-Allow-Headers\": \"Content-Type, Accept, Mcp-Session-Id\",\n },\n });\n }\n if (\n url.pathname.startsWith(\"/.well-known/\") || url.pathname === \"/register\"\n ) return new Response(\"Not found\", { status: 404 });\n if (req.method === \"GET\") {\n return new Response(\n \"CompTox Chemical MCP v2.1\\nPOST JSON-RPC 2.0 to this URL.\",\n { status: 200, headers: { \"Content-Type\": \"text/plain\" } },\n );\n }\n if (req.method === \"POST\") {\n let 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Diff · v6